Structurally Consistent Automatic Reconstruction (SCAR)

General concept

Using MILP and graph traversal algorithms, sets of biochemical reactions that fill gaps are identified, and then scored based on sequence homology. A divide and conquer implementation is used for genome-scale models.

Items to consider when implementing

Software packages with this method

Applications of interest

Description of study and link to study:

What was learned with this method:

Relevant references

Pitkā€°nen, et al.

Related methods

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