BioPathway Predictor/OptKnock

General concept

BioPathway Predictor predicts pathways that can produce a molecule of interest, based on known chemistry of molecule functional groups. Putative pathways are ranked based on several measures, such as thermodynamics and presence of enzymes in the organism. The predicted pathway is subsequently growth-coupled using OptKnock.

Items to consider when implementing

Software packages with this method

Applications of interest

Description of study and link to study:

What was learned with this method:

Relevant references

Yim, et al.

Related methods

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