Pruning for consistent ad functionem networks

General concept

Non-functional parts of a model can be removed to facilitate further analysis. Through the use of two approaches, all blocked reactions and non-producible metabolites can be removed from the network prune the model down to a fully functional model. Thermodynamic realizability is used in this too.

Items to consider when implementing

Software packages with this method

Applications of interest

Description of study and link to study:

What was learned with this method:

Relevant references

Hoffmann, et al.

Related methods

Unless otherwise stated, the content of this page is licensed under Creative Commons Attribution-ShareAlike 3.0 License